{"id":51,"date":"2018-04-18T16:51:37","date_gmt":"2018-04-18T16:51:37","guid":{"rendered":"https:\/\/my.dev.vanderbilt.edu\/tractem\/?page_id=51"},"modified":"2018-05-25T20:51:14","modified_gmt":"2018-05-25T20:51:14","slug":"protocol","status":"publish","type":"page","link":"https:\/\/my.dev.vanderbilt.edu\/tractem\/protocol\/","title":{"rendered":"Protocols for All Tracts"},"content":{"rendered":"<h2>TractEM White Matter Tractography Protocol<br \/>\nVersion 1.2 May 25, 2018<\/h2>\n<table>\n<tbody>\n<tr>\n<th>Tract Name<\/th>\n<th>Tract Code<\/th>\n<\/tr>\n<tr>\n<td>Anterior Commissure<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/18\/ac\/\">ac<\/a><\/td>\n<\/tr>\n<tr>\n<td>Anterior Corona Radiata<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/18\/acr\/\">acr<\/a><\/td>\n<\/tr>\n<tr>\n<td>Anterior Limb of the internal capsule<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/aic\/\">aic<\/a><\/td>\n<\/tr>\n<tr>\n<td>Body of Corpus Callosum<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/bcc\/\">bcc<\/a><\/td>\n<\/tr>\n<tr>\n<td>Cerebral Peduncle<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/cp\/\">cp<\/a><\/td>\n<\/tr>\n<tr>\n<td>Cingulum (cingulate gyrus part)<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/cgc\/\">cgc<\/a><\/td>\n<\/tr>\n<tr>\n<td>Cingulum (hippocampal part)<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/cgh\/\">cgh<\/a><\/td>\n<\/tr>\n<tr>\n<td>Corticospinal Tract<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/cst\/\">cst<\/a><\/td>\n<\/tr>\n<tr>\n<td>Fornix<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/fx\/\">fx<\/a><\/td>\n<\/tr>\n<tr>\n<td>Fornix (crus)\/ stria terminalis<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/fxst\/\">fxst<\/a><\/td>\n<\/tr>\n<tr>\n<td>Genu of the corpus callosum<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/gcc\/\">gcc<\/a><\/td>\n<\/tr>\n<tr>\n<td>Inferior Cerebellar Peduncle<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/icp\/\">icp<\/a><\/td>\n<\/tr>\n<tr>\n<td>Inferior Fronto Occipital Fasciculus<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/ifo\/\">ifo<\/a><\/td>\n<\/tr>\n<tr>\n<td>Inferior Longitudinal Fasciculus<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/ilf\/\">ilf<\/a><\/td>\n<\/tr>\n<tr>\n<td>Medial Lemniscus<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/ml\/\">ml<\/a><\/td>\n<\/tr>\n<tr>\n<td>Midbrain<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/m\/\">M<\/a><\/td>\n<\/tr>\n<tr>\n<td>Middle Cerebellar Peduncle<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/mcp\/\">mcp<\/a><\/td>\n<\/tr>\n<tr>\n<td>Olfactory Radiation<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/olfr\/\">olfr<\/a><\/td>\n<\/tr>\n<tr>\n<td>Optic Tract<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/19\/opt\/\">opt<\/a><\/td>\n<\/tr>\n<tr>\n<td>Posterior Corona Radiata<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/posterior-corona-radiata-pcr\/\">pcr<\/a><\/td>\n<\/tr>\n<tr>\n<td>Pontine Crossing Tract<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/pontine-crossing-tract-pct\/\">pct<\/a><\/td>\n<\/tr>\n<tr>\n<td>Posterior Limb of the Internal Capsule<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/posterior-limb-of-the-internal-capsule-pic\/\">pic<\/a><\/td>\n<\/tr>\n<tr>\n<td>Posterior Thalamic Radiation<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/posterior-thalamic-radiation-ptr\/\">ptr<\/a><\/td>\n<\/tr>\n<tr>\n<td>Sagittal Stratum<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/sagittal-stratum-ss\/\">ss<\/a><\/td>\n<\/tr>\n<tr>\n<td>Splenium of the Corpus Callosum<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/splenium-of-the-corpus-callosum-scc\/\">scc<\/a><\/td>\n<\/tr>\n<tr>\n<td>Superior Cerebellar Peduncle<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/superior-cerebellar-peduncle-scp\/\">scp<\/a><\/td>\n<\/tr>\n<tr>\n<td>Superior Corona Radiata<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/superior-corona-radiata-scr\/\">scr<\/a><\/td>\n<\/tr>\n<tr>\n<td>Superior Fronto Occipital Fasciculus<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/superior-fronto-occipital-fasciculus-sfo\/\">sfo<\/a><\/td>\n<\/tr>\n<tr>\n<td>Superior Longitudinal Fasciculus<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/superior-longitudinal-fasciculus-slf\/\">slf<\/a><\/td>\n<\/tr>\n<tr>\n<td>Tapetum of the Corpus Callosum<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/tapetum-of-the-corpus-callosum-tap\/\">tap<\/a><\/td>\n<\/tr>\n<tr>\n<td>Uncinate Fasciculus<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/uncinate-fasciculus-unc\/\">unc<\/a><\/td>\n<\/tr>\n<tr>\n<td>Cortical Associated White Matter (Frontal Lobe)<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/cortical-associated-white-matter-frontal-lobe-fl\/\">fl<\/a><\/td>\n<\/tr>\n<tr>\n<td>Cortical Associated White Matter (Parietal Lobe)<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/cortical-associated-white-matter-parietal-lobe-pl\/\">pl<\/a><\/td>\n<\/tr>\n<tr>\n<td>Cortical Associated White Matter (Occipital Lobe)<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/cortical-associated-white-matter-occipital-lobe-ol\/\">ol<\/a><\/td>\n<\/tr>\n<tr>\n<td>Cortical Associated White Matter (Temporal Lobe)<\/td>\n<td><a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/2018\/04\/20\/cortical-associated-white-matter-temporal-lobe-tl\/\">tl<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n","protected":false},"excerpt":{"rendered":"<p>TractEM White Matter Tractography Protocol Version 1.2 May 25, 2018 Tract Name Tract Code Anterior Commissure ac Anterior Corona Radiata acr Anterior Limb of the internal capsule aic Body of Corpus Callosum bcc Cerebral Peduncle cp Cingulum (cingulate gyrus part) &hellip; <a href=\"https:\/\/my.dev.vanderbilt.edu\/tractem\/protocol\/\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1920,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"open","ping_status":"closed","template":"","meta":{"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"class_list":["post-51","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/my.dev.vanderbilt.edu\/tractem\/wp-json\/wp\/v2\/pages\/51","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/my.dev.vanderbilt.edu\/tractem\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/my.dev.vanderbilt.edu\/tractem\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/my.dev.vanderbilt.edu\/tractem\/wp-json\/wp\/v2\/users\/1920"}],"replies":[{"embeddable":true,"href":"https:\/\/my.dev.vanderbilt.edu\/tractem\/wp-json\/wp\/v2\/comments?post=51"}],"version-history":[{"count":36,"href":"https:\/\/my.dev.vanderbilt.edu\/tractem\/wp-json\/wp\/v2\/pages\/51\/revisions"}],"predecessor-version":[{"id":611,"href":"https:\/\/my.dev.vanderbilt.edu\/tractem\/wp-json\/wp\/v2\/pages\/51\/revisions\/611"}],"wp:attachment":[{"href":"https:\/\/my.dev.vanderbilt.edu\/tractem\/wp-json\/wp\/v2\/media?parent=51"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}