Category Archives: Protocol

Protocol PDF Document (version 1.2): m Instructions: Create one coronal seed region (at approx. coronal slice 96), then run fiber tracking. Based on this output, ROA placement will be clearer. Create one axial ROA region superior to the seed region In … Continue reading →

Protocol PDF Document (version 1.2): mcp Instructions: Create two separate coronal seed regions (at approx. coronal slice 111), one on each side, then run fiber tracking. Based on this output, ROA placement will be clearer. Create one ROA region and draw … Continue reading →

Protocol PDF Document (version 1.2): ml Instructions: Create two separate axial seed regions (at approx. axial slice 40), one on each side. Create one ROA region on a sagittal slice at the midline. Check the left seed region and ROA region, … Continue reading →

Protocol PDF Document (version 1.2): olfr Instructions: Create two separate coronal seed regions (at approx. coronal slice 65), one on each side. Create one ROA region and draw a sagittal ROA slice at the midline In the region list, check only … Continue reading →

Protocol PDF Document (version 1.2): opt Instructions: Create four sagittal seed regions (at approx. sagittal slice 66, 70, 82, 91) on the orange dot, two on each side, then run fiber tracking. Based on this output, ROA placement will be clearer. Create … Continue reading →

Protocol PDF Document (version 1.2): gcc Instructions: Create one seed region (at approx. sagittal slice 80) on a sagittal slice at the midline. This posterior extent lines up with the anterior part of the body. (genu seed = purple, body seed … Continue reading →

Protocol PDF Document (version 1.2): fxst   Instructions: Create two separate coronal seed regions (at approx. coronal slice 111), one for each side. Create two separate coronal ROI regions (at approx. coronal slice 91), one for each side. Create an ROA region … Continue reading →

Protocol PDF Document (version 1.2): fx Instructions: Create two separate coronal seed regions (at approx. coronal slice 104), one for each side Create one coronal ROI regions (at approx. coronal slice 79), this will be used to generate the left fornix and … Continue reading →

Protocol PDF Document (version 1.2): cst Instructions: Create two separate axial seed regions (at approx. axial slice 49), one for each side Create two separate axial ROI regions (at approx. axial slice 39), one for each side. Create one ROA region and draw … Continue reading →

Protocol PDF Document (version 1.2): cp   Instructions: Create two separate axial seed regions (at approx. axial slice 59): one for each side. Create an ROA region and draw a sagittal ROA slice at the midline (at approx. sagittal slice … Continue reading →