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Recent Protocol Updates
- Cortical Associated White Matter Frontal Lobe (fl) April 20, 2018
- Cortical Associated White Matter Occipital Lobe (ol) April 20, 2018
- Uncinate Fasciculus (unc) April 20, 2018
- Cortical Associated White Matter Temporal Lobe (tl) April 20, 2018
- Tapetum of the Corpus Callosum (tap) April 20, 2018
Bookkeeping
Category Archives: Protocol
Cortical Associated White Matter Frontal Lobe (fl)
Protocol PDF Document (version 1.2): fl Instructions: Load the unique frontal lobe mask generated by a multi-atlas segmentation algorithm applied to the subject’s native space T1 image Set the tracking parameters max length(mm) to 150.0 Copy the left and right mask … Continue reading
Posted in Protocol
3,091 Comments
Cortical Associated White Matter Occipital Lobe (ol)
Protocol PDF Document (version 1.2): ol Instructions: Load the unique frontal lobe mask generated by a multi-atlas segmentation algorithm applied to the subject’s native space T1 image Set the tracking parameters max length(mm) to 150.0 Copy the left and right mask … Continue reading
Posted in Protocol
1,817 Comments
Uncinate Fasciculus (unc)
Protocol PDF Document (version 1.2): unc Instructions: Create two separate axial seed regions (at approx. axial slice 56), one for each side. Create one ROA region and draw two sagittal ROA slice near the midline – medial to the left seed (at … Continue reading
Posted in Protocol
9,899 Comments
Cortical Associated White Matter Temporal Lobe (tl)
Protocol PDF Document (version 1.2): tl Instructions: Load the unique frontal lobe mask generated by a multi-atlas segmentation algorithm applied to the subject’s native space T1 image Set the tracking parameters max length(mm) to 150.0 Copy the left and right mask … Continue reading
Posted in Protocol
2,129 Comments
Tapetum of the Corpus Callosum (tap)
Protocol PDF Document (version 1.2): tap Instructions: Create two separate axial regions (at approx. axial slice 82), one for each side – select one as a seed and the other as a ROI. Then run fiber tracking. Based on this output, … Continue reading
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2,345 Comments
Sagittal Stratum (ss)
Protocol PDF Document (version 1.2): ss Instructions: Create two separate axial seed regions (at approx. axial slice 64), one for each side. Create one ROA region and draw a sagittal ROA slice at the midline In the region list, check only the left … Continue reading
Posted in Protocol
3,655 Comments
Superior Longitudinal Fasciculus (slf)
Protocol PDF Document (version 1.2): slf Instructions: Create two separate coronal seed regions (at approx. coronal slice 96), one on each side. Create one ROA region and draw a sagittal ROA slice at the midline In the region list, check only the … Continue reading
Posted in Protocol
6,369 Comments
Superior Fronto Occipital Fasciculus (sfo)
Protocol PDF Document (version 1.2): sfo Instructions: Create two separate coronal seed regions (at approx. coronal slice 75), one for each side. Create two separate coronal ROI regions (at approx. coronal slice 69), one for each side. Create one ROA region … Continue reading
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5,762 Comments
Superior Corona Radiata (scr)
Protocol PDF Document (version 1.2): scr Instructions: Create two separate axial seed regions (at approx. axial slice 99), one for each side. Create one ROA region and draw a sagittal ROA slice at the midline In the region list, check only the left … Continue reading
Posted in Protocol
7,850 Comments
Superior Cerebellar Peduncle (scp)
Protocol PDF Document (version 1.2): scp Instructions: Create two separate coronal seed regions (at approx. coronal slice 114), one for each side. Create two separate coronal ROI regions (at approx. coronal slice 104), one for each side. Then run fiber tracking. Based on … Continue reading
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7,057 Comments